We have a series of posts on how to access data in the NCBI Sequence Read Archive that we have assembled over time. These will hopefully guide you on a journey of discovery through that data!

• The perils of fast(er)q-dump
• SRA Metadata with JSON
• SRA Metadata
• SRA attributes
• Similarity Searching the SRA
• Search SRA Metadata in the Cloud
• Search SRA Data
• Runs and Experiments in the SRA
• Metagenomes with and without crAssphage
• Instruments in the SRA
• Identifying Metagenomes from the SRA in the Cloud
• How many bp of metagenomes are there in the SRA?
• Hidden SRA metadata
• Getting WGS data from GenBank via the SRA
• Getting data from the SRA
• fastq-dump options
• fastq-dump
• Describing metagenomes in the SRA
• All the ways to get metagenomics data from the SRA
• Accessing SRA in the Cloud