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Transition in Vibrio spp. correlates with human activity in the Northern Line Islands Robert Schmieder, Tracy McDole, Elizabeth Dinsdale, Matthew Haynes, Forest Rohwer, Robert Edwards
Presented at: International Coral Reef Symposium (ICRS) 2008 Download PDF file (3.5 MB) |
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ADAPTdb/ADAPT – A Framework for the Analysis of ARISA Data Sets Robert Schmieder, Matthew Haynes, Elizabeth Dinsdale, Forest Rohwer, and Robert Edwards
Presented at: Metagenomics 2008 Download PDF file (1.2 MB) |
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ADAPTdb/ADAPT – A Framework for the Analysis of ARISA Data Sets Robert Schmieder, Matthew Haynes, Elizabeth Dinsdale, Forest Rohwer, and Robert Edwards
Presented at: ISMB/ECCB and M3 2009 Download PDF file (812 KB) |
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Deviation of amino acid utilization and correlation with G+C composition in bacterial genome Sajia Akhter, Hochul K Lee, Barbara Bailey, Peter Salamon, Robert Edwards
Presented at: Applied Computational Science and Engineering Student Support (ACSESS) 2009 Download PDF file (1.6 MB) |
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Assembler for SOLiD data: by Improving memory management of Velvet assembler Sajia Akhter and Robert Edwards
Presented at: Rocky Mountain Bioinformatics Conference (Rocky) 2009 Download PDF file (1.0 MB) |
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Phage Annotation Tools and Methods Ramy K. Aziz, Bhakti Dwivedi, Joe Anderson, Bonnie Hurwitz, JP Massar, Mya Breitbart, Matthew Sullivan, Jeff Elhai and Robert A. Edwards
Presented at: Rocky Mountain Bioinformatics Conference (Rocky) 2009 Download PDF file (940 KB) |
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Tools for Quality Control and Preprocessing of Metagenomic Datasets Robert Schmieder, Yan Wei Lim and Robert Edwards
Presented at: Pacific Symposium on Biocomputing (PSB) 2011 Download PDF file (4.2 MB) |
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FACIL: fast and accurate genetic code inference and logo Bas E. Dutilh, Rasa Jurgelenaite, Radek Szklarczyk, Sacha A.F.T. van Hijum, Harry R. Harhangi, Markus Schmid, Bart de Wild, Kees-Jan Françoijs, Hendrik G. Stunnenberg, Marc Strous, Mike S.M. Jetten, Huub J.M. Op den Camp and Martijn A. Huynen
Presented at: SDMG All Day Meeting 2011 Download PDF file (3.6 MB) |
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Genomic Comparison of Salmonella enterica Serovars Enteritidis and Dublin D. Matthews, R. Schmieder, J. Busch, N. Cassman, M. Doherty, D. Green, B. Matolock, B. Heffernan, G. Olsen, L. Farris, D. Schiffeli, S. Maloy, E. Dinsdale, and R. Edwards
Presented at: ASM 2011 Download PDF file (561 KB) |
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PhiSpy: A novel similarity-independent tool for predicting prophages in microbial genomes Sajia Akhter, Ramy K Aziz, Robert A Edwards
Presented at: Evergreeen International Phage Biology Meeting Download PDF file (1.5 MB) |
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Tools for Detecting Macrolide Resistance in the Human Microbiome Robert Schmieder, Yan Wei Lim, Anca Segall, Molly Schmid, and Robert Edwards
Presented at: Advances in Genome Biology & Technology (AGBT) 2012 Download PDF file (1.2 MB) |
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Host prediction for viral metagenomes using oligonucleotide profiles Michiyo Wellington-Oguri, Robert Schmieder, Barbara Bailey, Robert A. Edwards, and Bas E. Dutilh
Presented at: Student Research Symposium (SRS) 2012 Download PDF file (705 KB) |
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Database Structure and Visualization Software for Microbial Physiology Data Nicholas Turner, Haquio Liu, Jeremy Frank, and Robert Edwards
Presented at: Student Research Symposium (SRS) 2012 Download PDF file (176 KB) |
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Tools for Fast Sequence Alignment Sajia Akhter and Robert Edwards
Presented at: Student Research Symposium (SRS) 2012 Download PDF file (1.3 MB) |
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Real-Time Metagenomics Analysis Daniel A. Cuevas, Joshua A. Hoffman and Robert A. Edwards
Presented at: ASM 2010 Download PDF file (980 KB) |
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Investigating the Frequency of Quinolone Resistance Genes in Environmental Samples Sajia Akhter, Anca M. Segall, Molly Schmid and Robert A. Edwards
Presented at: ASM 2010 Download PDF file (1.5 MB) |
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Identification of Macrolide Resistance Alleles in Environmental Metagenomes Robert Schmieder, Anca Segall, Molly Schmid and Robert Edwards
Presented at: ASM 2010 Download PDF file (2.7 MB) |
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Fast Identification and Removal of Sequence Contaminations from Genomic and Metagenomic Datasets Robert Schmieder and Robert Edwards
Presented at: Human Microbiome Meeting 2010 Download PDF file (1.2 MB) |
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PHANTOME: Phage Annotation Tools and Methods Ramy K. Aziz, Brad Hull, Bhakti Dwivedi, Joe Anderson, Bonnie Hurwitz, JP Massar, Matthew Sullivan, Jeff Elhai, Mya Breitbart, Ross Overbeek and Robert A. Edwards
Presented at: Institut Pasteur Virus of Microbes meeting 2010 Download PDF file (808 KB) |
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Phages Without Borders: Distribution of Phage Nucleic Acids in 310 Metagenomes Ramy K. Aziz, Mya Breitbart and Robert A. Edwards
Presented at: ASM 2010 Download PDF file (1.9 MB) |
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Phage Annotation Tools and Methods Ramy K. Aziz, Bhakti Dwivedi, Joe Anderson, Bonnie Hurwitz, Brad Hull, JP Massar, Mya Breitbart, Matthew Sullivan, Jeff Elhai and Robert A. Edwards
Presented at: ASM 2010 Download PDF file (924 KB) |
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Predicting Phage Preferences: Lytic vs. Lysogenic Lifestyle from Genomes Katelyn McNair, Rob Edwards and Barbara Bailey
Presented at: CSHL meeting 2010 Download PDF file (269 KB) |
We like to present posters and we maintain a rotating display of them in the 2nd and 4th floor halls of GMCS at SDSU. Come by and see them life-sized sometime. Here are some of our posters. If you see us at a meeting, say hi!