We recently released our new fastq-pair code that allows you to synchronize fastq files that are out of order. Here are some more data sets that you can use to test out fastq-pair.
These data sets are straight from the sequence read archive. If you are interested in getting more data, you here is a description of how to download more data and a list of metagenomes to search through.
|Left sequence file||Right sequence file|
|ERR1018277_pass_1.fastq [2.6 GB]||ERR1018277_pass_2.fastq [1.7 GB]|
|ERR1136747_pass_1.fastq.gz [1.1 GB]||ERR1136747_pass_2.fastq.gz [843 MB]|
|ERR1137199_pass_1.fastq.gz [505 MB]||ERR1137199_pass_2.fastq.gz [513 MB]|
These should give you the following results:
Left paired: 19,098,512 Right paired: 19,098,512
Left single: 11,236,994 Right single: 0
Left paired: 10,366,657 Right paired: 10,366,657
Left single: 4,323,173 Right single: 0
Left paired: 6,595,356 Right paired: 6,595,356
Left single: 0 Right single: 0